Publications with ATTO-Dyes:

P.S. Dittrich, P. Schwille, Photobleaching and stabilization of fluorophores used for single-molecule analysis with one- and two-photon excitation, Appl. Phys. B 73, 829 (2001).

K. Swift, S.N.Anderson, E. Matayoshi, Dual laser fluorescence correlation spectroscopy as a biophysical probe of binding interactions - Evaluation of new red fluorescent dyes, SPIE 4252, 47 (2001).

G. von Bünau, Photochemistry in Siegen, The Spectrum 15 (4), 1 (2002).

N. U. Kemnitzer et al., Fluorescent Dyes – Detection Methods of the Future, BIOforum International 5, 242 (2002).

V. Buschmann, K.D. Weston, M. Sauer, Spectroscopic Study and Evaluation of Red-Absorbing Fluorescent Dyes, Bioconjugate Chem. 14, 195 (2003).

H. Maas, G. Calzaferri, Constructing dye-zeolite photonic nanodevices, The Spectrum 16 (3), 18 (2003).

F. Koberling, M. Wahl, M. Patting, H.-J. Rahn, P. Kapusta, R. Erdmann, Two channel fluorescence lifetime microscopy with two colour laser excitation, single molecule sensitivity and sub-micrometer resolution, SPIE 5143, 181 (2003).

D. Salerno, J.-R. Daban, Comparative study of different dyes for the detection of proteins on membranes using the peroxyoxalate chemiluminescent reaction, J. Chromatogr. B 793, 75 (2003).

N. Marme, J.P. Knemeyer, M. Sauer, J. Wolfrum, Inter- and Intramolecular Fluorescence Quenching of Organic Dyes by Tryptophan, Bioconjugate Chem. 14, 1133 (2003).

R.E. Bailey, S. Nie, Alloyed Semiconductor Quantum Dots: Tuning the Optical
Properties without Changing the Particle Size, J. Am. Chem. Soc. 125, 7100 (2003).

E. Haustein, M. Jahnz, P Schwille, Triple FRET: A tool for Studying Long-
Range Molecular Interactions, ChemPhysChem 4, 745 (2003).

N. Marme, J.-P. Knemeyer, J. Wolfrum, M. Sauer, Highly Sensitive Protease Assay Using Fluorescence Quenching of Peptide Probes Based on Photoinduced Electron Transfer, Angew. Chem. Int. Ed. 43, 3798 (2004).
N. Marme , J.-P. Knemeyer, J. Wolfrum, M. Sauer, Ein hochempfindliches Nachweisverfahren für Proteasen basierend auf Fluoreszenzlöschung von
Peptidsonden durch photoinduzierten Elektronentransfer, Angew. Chem. 116, 3886 (2004).

S. Huber, G. Calzaferri, Energy Transfer from Dye - Zeolite L Antenna Crystals to Bulk Silicon, ChemPhysChem 5, 239 (2004).

K.G. Heinze, M. Jahnz, P. Schwille, Triple-Color Coincidence Analysis: One Step Further in Following Higher Order Molecular Complex Formation, Biophys. J. 86 (1), 506 (2004).

M. Heilemann, P. Tinnefeld, G. Sanchez Mosteiro, M. Garcia Parajo, N.F. Van Hulst, M. Sauer, Multistep Energy Transfer in Single Molecular Photonic Wires, J. Am. Chem. Soc. 126, 6514 (2004).

Y. Ebenstein, T. Mokari, U. Banin, Quantum-Dot-Functionalized Scanning Probes for Fluorescence-Energy-Transfer-Based Microscopy, J. Phys. Chem. B 108, 93 (2004).

S. Brakmann, Optimal Enzymes for Single-Molecule Sequencing, Current Pharmazeutical Biotechnology 5, 119 (2004).

A.B. Artyukhin, O. Bakajin, P. Stroeve, A. Noy, Layer-by-Layer Electrostatic Self-Assembly of Polyelectrolyte Nanoshells on Individual Carbon Nanotube
Templates, Langmuir 20, 1442 (2004).

Y. Xiao, V. Buschmann, K.D. Weston, Scanning Fluorescence Correlation Spectroscopy: A Tool for Probing Microsecond Dynamics of Surface-Bound Fluorescent Species, Anal. Chem. 77, 36 (2005).

P. Tinnefeld, M. Heilemann, M. Sauer, Design of Molecular Photonic Wires Based on Multistep Electronic Excitation Transfer, ChemPhysChem 6, 217 (2005).

B. Krämer, F. Koberling, PicoQuant GmbH, Time-Gated Fluorescence Correlation Spectroscopy for Improved Concentration Determinations, PicoQuant Application Note TG-FCS analysis, 2005.

B.K. Müller, E. Zaychikov, C. Bräuchle, D.C. Lamb, Pulsed Interleaved Excitation, Biophys J BioFAST, (2005)

M. Hofmann, C. Eggeling, S. Jakobs, S.W. Hell, Breaking the diffraction barrier in fluorescence microscopy at low light intensities by using reversibly photoswitchable proteins, PNAS 102 (49), 17565-17569, (2005).

S. Lata, M. Gavutis, R. Tampe, J. Piehler, Specific and Stable Fluorescence Labeling of Histidine-Tagged Proteins for Dissecting Multi-Protein Complex Formation, J.Am.Chem.Soc. 128, 2365-2372, (2006).

J.P. Klare, E. Bordignon, M. Doebber, J. Fitter, J. Kriegsmann, I. Chizhov, H.J. Steinhoff, M. Engelhard, Effects of Solubilization on the Structure and Function
of the Sensory Rhodopsin II/Transducer Complex, J. Mol. Biol. 356, 1207-1221, (2006).

C. Eggeling, J. Widengren, L. Brand, J. Schaffer, S. Felekyan, C.A.M. Seidel, Analysis of Photobleaching in Single-Molecule Multicolor Excitation and Förster Resonance Energy Transfer Measurements, J. Phys. Chem. A 110 , 2979-2995, (2006)

E.K.L. Yeow, S.M. Melnikov, T.D.M. Bell, F.C. De Schryver, J. Hofkens, Characterizing the Fluorescence Intermittency and Photobleaching Kinetics of Dye
Molecules Immobilized on a Glass Surface, J. Phys. Chem. A 110 1726-1734, (2006).

C. van der Does, C. Presenti, K. Schulze, S. Dinkelaker, R. Tampe, Kinetics of the ATP Hydrolysis Cycle of the Nucleotidebinding Domain of Mdl1 Studied by a Novel Site-specific Labeling Technique, JBiolChem 281 (9), 5694-5701, (2006)

M. Antonik, S. Felekyan, A. Gaiduk, C.A.M. Seidel, Separating Structural Heterogeneities from Stochastic Variations in Fluorescence Resonance
Energy Transfer Distributions via Photon Distribution Analysis, J. Phys. Chem. B 110, 6970-6978, (2006).

M. Schröder, E. von Lieres, J. Hubbuch, Direct Quantification of Intraparticle Protein Diffusion in Chromatographic Media, J. Phys. Chem. B 110, 1429-1436, (2006).

J.N. Clifford, T.D.M. Bell, P. Tinnefeld, M. Heilemann, S.M. Melnikov, J. Hotta, M. Sliwa, P. Dedecker, M. Sauer, J. Hofkens, and E.K.L. Yeow, Fluorescence of Single Molecules in Polymer Films: Sensitivity of Blinking to Local Environment, J. Phys. Chem. B Letters 111, 6987-6991, (2007).

A. Friedrich, J.D. Hoheisel, N. Marmé, J.-P. Knemeyer, DNA-probes for the highly sensitive identification of single nucleotide polymorphism using single-molecule spectroscopy, FEBS Letters 581, 1644-1648, (2007).

Chunlai Chen, Wenjuan Wang, Zhang Wang, Fang Wei and Xin Sheng Zhao, Influence of secondary structure on kinetics and reaction mechanism of DNA hybridization, Nucleic Acids Research 35 (9), 2875-2884, (2007).

Xiaotao Pan, Willy Foo, Wanrong Lim, Marcus H. Y. Fok, Ping Liu, Hanry Yu, Ichiro Maruyama, Thorsten Wohlanda, Multifunctional fluorescence correlation microscope for intracellular and microfluidic measurements, Review of Scientific Instruments 78, 053711 (2007).

N. Marmé, J-P. Knemeyer, Sensitive bioanalysis - combining single-molecule
spectroscopy with mono-labeled self-quenching probes, Anal Bioanal Chem 388, 1075-1085, (2007).